Training Robust Ensembles Requires Rethinking Lipschitz Continuity
Ebrahimpour-Boroojeny, A., Sundaram, H., & Chandrasekaran, V. (2024). LOTOS: Layer-wise Orthogonalization for Training Robust Ensembles. arXiv preprint arXiv:2410.05136.
CV
Education
- Ph.D in Version Control Theory, GitHub University, 2018 (expected)
- M.S. in Jekyll, GitHub University, 2014
- B.S. in GitHub, GitHub University, 2012
Work experience
- Spring 2024: Academic Pages Collaborator
- Github University
- Duties includes: Updates and improvements to template
- Supervisor: The Users
- Fall 2015: Research Assistant
- Github University
- Duties included: Merging pull requests
- Supervisor: Professor Hub
- Summer 2015: Research Assistant
- Github University
- Duties included: Tagging issues
- Supervisor: Professor Git
Skills
- Skill 1
- Skill 2
- Sub-skill 2.1
- Sub-skill 2.2
- Sub-skill 2.3
- Skill 3
Publications
Intracellular spatial transcriptomic analysis toolkit (InSTAnT)
Kumar, A., Schrader, A. W., Aggarwal, B., Boroojeny, A. E., Asadian, M., Lee, J., ... & Sinha, S. (2024). Intracellular spatial transcriptomic analysis toolkit (InSTAnT). Nature communications, 15(1), 7794.
Spectrum Extraction and Clipping for Implicitly Linear Layers
Ebrahimpour Boroojeny, A., Telgarsky, M. & Sundaram, H.. (2024). Spectrum Extraction and Clipping for Implicitly Linear Layers. Proceedings of The 27th International Conference on Artificial Intelligence and Statistics, in Proceedings of Machine Learning Research 238:2971-2979.
BPPart: RNA-RNA interaction partition function in the absence of entropy
Ebrahimpour-Boroojeny, A., Rajopadhye, S., & Chitsaz, H. (2021). BPPart: RNA-RNA interaction partition function in the absence of entropy. In 21st International Workshop on Algorithms in Bioinformatics (WABI 2021).
PyGTED: Python Application for Computing Graph Traversal Edit Distance
Ebrahimpour Boroojeny, A., Shrestha, A., Sharifi-Zarchi, A., Gallagher, S. R., Sahinalp, S. C., & Chitsaz, H. (2020). PyGTED: Python application for computing graph traversal edit distance. Journal of Computational Biology, 27(3), 436-439.
Graph traversal edit distance and extensions
Ebrahimpour Boroojeny, A., Shrestha, A., Sharifi-Zarchi, A., Gallagher, S. R., Sahinalp, S. C., & Chitsaz, H. (2020). Graph traversal edit distance and extensions. Journal of Computational Biology, 27(3), 317-329.
Enrichment of ovine gonadotropes via adenovirus gene targeting enhances assessment of transcriptional changes in response to estradiol-17 beta
Murtazina, D. A., Arreguin-Arevalo, J. A., Cantlon, J. D., Ebrahimpour-Boroojeny, A., Shrestha, A., Hicks, J. A., ... & Clay, C. M. (2020). Enrichment of ovine gonadotropes via adenovirus gene targeting enhances assessment of transcriptional changes in response to estradiol-17 beta. Biology of Reproduction, 102(1), 156-169.
GTED: Graph traversal edit distance
Boroojeny, A. E., Shrestha, A., Sharifi-Zarchi, A., Gallagher, S. R., Sahinalp, S. C., & Chitsaz, H. (2018). GTED: Graph traversal edit distance. In Research in Computational Molecular Biology: 22nd Annual International Conference, RECOMB 2018, Paris, France, April 21-24, 2018, Proceedings 22 (pp. 37-53). Springer International Publishing.
Time-Delay Estimation in State and Output Equations of Nonlinear Systems Using Optimal Computational Approach
Abooshahab, M. A., Ekramian, M., Ataei, M., & Ebrahimpour-Boroojeny, A. (2019). Time-delay estimation in state and output equations of nonlinear systems using optimal computational approach. Journal of Optimization Theory and Applications, 180, 1036-1064.
Talks
The AAAI-25 Workshop on Artificial Intelligence for Cyber Security (AICS)
Oral Presentation at Pennsylvania Convention Center, Philadelphia PA, USA
Neurips 2023 Workshop on Mathematics of Modern Machine Learning
Poster Presentation at Ernest N. Morial Convention Center, New Orleans LA, USA
qBio 2019 Conference
Poster Presentation at UC San Francisco, qBio 2019, San Francisco CA, USA
Teaching
Service and leadership
- Currently signed in to 43 different slack teams