Ebrahimpour-Boroojeny, A., Sundaram, H., & Chandrasekaran, V. (2025). Not All Wrong is Bad: Using Adversarial Examples for Unlearning. In Forty-second International Conference on Machine Learning (ICML 2025).
Ebrahimpour-Boroojeny, A., Sundaram, H., & Chandrasekaran, V. (2025). Training Robust Ensembles Requires Rethinking Lipschitz Continuity. In The Thirteenth International Conference on Learning Representations (ICLR 2025).
Kumar, A., Schrader, A. W., Aggarwal, B., Boroojeny, A. E., Asadian, M., Lee, J., ... & Sinha, S. (2024). Intracellular spatial transcriptomic analysis toolkit (InSTAnT). Nature communications, 15(1), 7794.
Ebrahimpour Boroojeny, A., Telgarsky, M. & Sundaram, H.. (2024). Spectrum Extraction and Clipping for Implicitly Linear Layers. Proceedings of The 27th International Conference on Artificial Intelligence and Statistics, in Proceedings of Machine Learning Research 238:2971-2979.
Ebrahimpour-Boroojeny, A., Rajopadhye, S., & Chitsaz, H. (2021). BPPart: RNA-RNA interaction partition function in the absence of entropy. In 21st International Workshop on Algorithms in Bioinformatics (WABI 2021).
Ebrahimpour Boroojeny, A., Shrestha, A., Sharifi-Zarchi, A., Gallagher, S. R., Sahinalp, S. C., & Chitsaz, H. (2020). PyGTED: Python application for computing graph traversal edit distance. Journal of Computational Biology, 27(3), 436-439.
Ebrahimpour Boroojeny, A., Shrestha, A., Sharifi-Zarchi, A., Gallagher, S. R., Sahinalp, S. C., & Chitsaz, H. (2020). Graph traversal edit distance and extensions. Journal of Computational Biology, 27(3), 317-329.
Murtazina, D. A., Arreguin-Arevalo, J. A., Cantlon, J. D., Ebrahimpour-Boroojeny, A., Shrestha, A., Hicks, J. A., ... & Clay, C. M. (2020). Enrichment of ovine gonadotropes via adenovirus gene targeting enhances assessment of transcriptional changes in response to estradiol-17 beta. Biology of Reproduction, 102(1), 156-169.
Boroojeny, A. E., Shrestha, A., Sharifi-Zarchi, A., Gallagher, S. R., Sahinalp, S. C., & Chitsaz, H. (2018). GTED: Graph traversal edit distance. In Research in Computational Molecular Biology: 22nd Annual International Conference, RECOMB 2018, Paris, France, April 21-24, 2018, Proceedings 22 (pp. 37-53). Springer International Publishing.
Abooshahab, M. A., Ekramian, M., Ataei, M., & Ebrahimpour-Boroojeny, A. (2019). Time-delay estimation in state and output equations of nonlinear systems using optimal computational approach. Journal of Optimization Theory and Applications, 180, 1036-1064.
Oral Presentation at Pennsylvania Convention Center, Philadelphia PA, USA
Poster Presentation at Ernest N. Morial Convention Center, New Orleans LA, USA
Poster Presentation at UC San Francisco, qBio 2019, San Francisco CA, USA